SalFoS

The Salmonella Foodborne Syst-OMICS database

The Salmonella Foodborne Syst-OMICS Database

A Syst-OMICS approach to ensuring food safety and reducing the economic burden of Salmonellosis

SalFoS is a repository of thousands of Salmonella isolates from the environment, plant and animal food products as well as human infections, with a strong focus on fruits and vegetables.

 

SalFoS currently contains 2498 isolates.
Draft genomes have been produced for 2482 of them.

 

The content of the SalFoS database can be accessed here

 Other useful resources:

SISTR: Salmonella In Silico Typing Resource: lfz.corefacility.ca/sistr-app/

Centers for Disease Control and Prevention, Salmonella: www.cdc.gov/salmonella 

Salmonella Genetic Stock Centre (Dr. K. E. Sanderson, Director): people.ucalgary.ca/~kesander

Salmonella enterica Pathway Genome Database in BioCyc : salmonella.biocyc.org

Enterobase: enterobase.warwick.ac.uk

PATRIC, The bacterial bioinformatics database and analysis pipeline: www.patricbrc.org

The Comprehensive antibiotic resistance database: arpcard.mcmaster.ca

The Public databases for molecular typing and microbial genome diversity: pubmlst.org

The Virulence factor database: www.mgc.ac.cn/VFs and www.phidias.us/victors/index.php